Analytical ultracentrifugation
Program
Monday
- 13:00-15:00 Theory of analytical ultracentifugation
- 15:00-15:30 Break
- 15:30-16:00 Check-out the centrifuge
- 16:00-17:00 Experimental strategies and intro to biological system
- 17:00 - ... Design of experiments
Tuesday
- 9:00-12:00 Assembly of cells, start velocity run
- 12:00-14:00 Lunch Break
- 14:00-16:00 Software setup and tutorial
- 16:00-17:30 Start second run (optional)
Wednesday
- 10:00-12:00 Data analysis
- 12:00-14:00 Break
- 14:00-16:00 Presentation and discussion of results
- 16:00 cell disassembly
Group 1
- Yu-Wei Shieh, Cornelia Klein
- sample: a) 0.2 EDTA; b) + 1 mM MgCl2
Group 2
- Christian Duellberg; Rajesh Bhardwaj
- sample a) 50 mM NaCl; b) + glutaraldehyde for fixation
Group 3
- Barbara Roider; Vladimir Teif
- sample: a) fibers + H1 in 50 mM NaCl; b) add NaCl to 500 mM to induce dissociation of H1
Slides and handouts
Papers
- Intro to hydrodynamics by Bloomfield
- AUC review Lebowitz 2002
- AUC review Cole 2008
- AUC chromatin fibers Kepert 2005
- Snz protein Neuwirth 2009
Links
- Sedfit homepage; download sedfit exe file
- Sednterp hompage; download sednterp exe file
- Hydrodynamics simulation Garcia de la Torre
- Ultrascan homepage
Contact: E-Mail