BioQuant > Research Groups > Chromatin Networks > Publications

Publications

2026

Sester LS, Galeva I, de Castilhos J, Borisov V, Gambihler A, Kilian M, Vonhören D, Friedrich M, Poschet G, Steiger S, Chechenina A, Lettau K, Kohlberger C, Prokoph N, Frenking J, John L, Huhn S, Reichert P, Mai E, Rippe K, Sauer S, Müller-Tidow C, Weinhold N, Platten M, Goldschmidt H, Raab M, Stein-Thoeringer C (2026). Fiber intake associates with increased treatment response in multiple myeloma patients along changes in gut microbiome. Blood Adv., in press.

Seufert I, Gerosa I, Varamogianni-Mamatsi V, Vladimirova A, Sen E, Mantz S, Rademacher A, Schumacher S, Liakopoulos P, Kolovos P, Anders S, Mallm JP, Papantonis A, Rippe K (2026) Two distinct chromatin modules regulate proinflammatory gene expression. Nat CellBiol 28, 182-196 doi: 10.1038/s41556-025-01819-2 | Abstract | Reprint | Article metrics | Press release

Seufert I, Vargas C, Wille SJ, Rippe K (2026) Deregulated enhancer-promoter communication in cancer through altered nuclear architecture. Int J Cancer 158, 409-422. doi: 10.1002/ijc.35424 | Abstract | Reprint | Article metrics

Preprints

Kraemer S, Staeble S, Schönung M, Hartmann M, Hakobyan M, Knoch J, Bogeska R, Anstee N, Langstein J, Muecke O, Weichenhan D, Helf MBM, Czeh M, Imbusch C, Brors B, Haas S, Rippe J-PMK, Rosenbauer F, Fröhling S, Plass C, Schlesner M, Milsom MD, Lipka DB (2025) CpG-level DNA methylation analysis identifies molecular events that are definitive ofprogressive lineage commitment in hematopoiesis. Blood (ASH Abstract). doi: https://doi.org/10.1182/blood-2025-205.

Wagner TR, Kehl N, Steiger S, Boschert T, Kilian M, Foster K, Hernandez GM, Ctortecka C, Michel J, Schach A, Zoller J, Metzler A, Onken R, Schönfelder B, Renders S, Torres CM, Sester LS, Frenking JH, Werner F, Osen W, Lindner K, Sen E, Schumacher S, Galas-Filipowicz D, Fitzsimons E, Green EW, Schmidt P, Lindner JM, Uhrig S, Bunse L, Chain B, Goldschmidt H, Weinhold N, Fröhling S, Trumpp A, Abelin JG, Carr SA, Yong K, Müller-Tidow C, Rippe K, Raab MS, Platten M, Eichmüller SB, Friedrich MJ (2025) Conserved programs and specificities of T cells targeting hematological malignancies. bioRxiv: 2025.2008.2007.668919. doi: 10.1101/2025.08.07.668919 | Abstract | Reprint | Article metrics

Joshi P, Stelzer T, Okonechnikov K, Sarropoulos I, Sepp M, Pour-Jamnani MV, Rademacher A, Yamada-Saito T, Schneider C, Schmidt J, Schäfer P, Leiss K, Bortolomeazzi M, Mallm J-P, da Silva PBG, Statz B, Wittmann A, Schramm K, Blattner-Johnson M, Fiesel P, Jones B, Milde T, Pajtler K, van Tilburg CM, Witt O, Rippe K, Korshunov A, Jones DTW, Hovestadt V, Northcott PA, Thongjuea S, Jäger N, Kaessmann H, Pfister SM, Kutscher LM (2024) Gene regulatory network landscape of Group 3/4 medulloblastoma. bioRxiv,2024.2002.2009.579680. doi: 10.1101/2024.02.09.579680 | Abstract | Reprint | Article metrics

Weinmann R, Udupa A, Nickels JF, Frank L, Knotz C, Rippe K (2024) HP1 binding creates a local barrier against transcription activation and persists during chromatin decondensation. bioRiv, 2024.2012.2009.627308. doi: 2024.2012.2009.627308 | Abstract | Reprint | Article metrics

Selected recent publications 2021-2026 (more selected publications)

Seufert I, Gerosa I, Varamogianni-Mamatsi V, Vladimirova A, Sen E, Mantz S, Rademacher A, Schumacher S, Liakopoulos P, Kolovos P, Anders S, Mallm JP, Papantonis A, Rippe K (2026) Two distinct chromatin modules regulate proinflammatory gene expression. Nat Cell Biol 28, 182-196 doi: 10.1038/s41556-025-01819-2 | Abstract | Reprint | Article metrics | Press release

Rademacher A, Huseynov A, Bortolomeazzi M, Wille SJ, Schumacher S, Sant P, Keitel D, Okonechnikov K, Ghasemi D, Pajtler K, Mallm JP, Rippe K (2025) Comparison of spatial transcriptomics technologies used for tumor cryosections. Genome Biol 26, 176. doi: 10.1101/2024.04.03.586404 | Abstract | Reprint | Article metrics

Piroeva KV, McDonald C, Xanthopoulos C, Fox C, Clarkson CT, Mallm J-P, Vainshtein Y, Ruje L, Klett LC, Stilgenbauer S, Mertens D, Kostareli E*, Rippe K*, Teif VB* (2023) Nucleosome repositioning in chronic lymphocytic leukaemia. Genome Res 33, 1649-1661. *corresponding authors. doi: 10.1101/gr.277298.122 | Abstract | Reprint | Article metrics

Poos AM, Prokoph N, Przybilla MJ, Mallm J-P, Steiger S, Seufert I, John L, Tirier SM, Bauer K, Baumann A, Munawar U, Rasche L, Kortuem M, Giesen N, Huhn S, Reichert P, Mueller-Tidow C, Goldschmidt H, Stegle O, Raab MS, Rippe K*, Weinhold N* (2023) Resolving therapy resistance mechanisms in multiple myeloma by multiomics subclone analysis. Blood 142, 1633-1646. *corresponding authors. doi: 10.1182/blood.2023019758 | Abstract | Reprint | Article metrics | Press release (German)

Trojanowski J, Frank L, Rademacher A, Mücke N, Grigaitis P, Rippe K (2022) Transcription activation is enhanced by multivalent interactions independent of phase separation. Mol Cell 82, 1878-1893. doi: 10.1016/j.molcel.2022.04.017 | Abstract | Reprint | Article metrics

Frank L, Rademacher A, Mücke N, Tirier SM, Koeleman E, Knotz C, Schumacher S, Stainczyk SA, Westermann F, Fröhling S, Chudasama P, Rippe K (2022) ALT-FISH quantifies alternative lengthening of telomeres activity by imaging of single-stranded repeats. Nucleic Acids Res 50, e61. doi: 10.1093/nar/gkac113 | Abstract | Reprint | Article metrics

Tirier SM, Mallm J-P, Steiger S, Poos AM, Awwad M, Giesen N, Casiraghi N, Susak H, Bauer K, Baumann A, John L, Seckinger A, Hose D, Müller-Tidow C, Goldschmidt H, Stegle O, Hundemer M, Weinhold N, Raab MS, Rippe K (2021) Subclone specific microenvironmental impact and drug response in refractory multiple myeloma revealed by single cell transcriptomics. Nat Commun 12, 6960. doi: 10.1038/s41467-021-26951-z | Abstract | Reprint | Article metrics

All publications 1989-2025

All publications Karsten Rippe, h-index 79 (Google Scholar)

Publications and bibliometric data of Karsten Rippe from databases

Yearly citation numbers of Karsten Rippe from 2006 to 2026 from Google Scholar.

Total number of citations: 24,801

h-index: 79

i10-index: 187