BIOQUANT

Publications

Publications

2022

Rademacher A, Weinmann R, Erdel F, Rippe K (2022) Assessing the phase separation propensity of proteins in living cells through optodroplet formation. Meth Mol Biol 2563, in press, in Phase-Separated Biomolecular Condensates, eds. Zhou HX, Spille JH, Banerjee P. Humana New York, NY.

Trojanowski J, Frank L, Rademacher A, Mücke N, Grigaitis P, Rippe K (2022) Transcription activation is enhanced by multivalent interactions independent of phase separation. Mol Cell published online 4 May 2022. doi: 10.1016/j.molcel.2022.04.017 | Abstract | Reprint | Article metrics

Gunkel M, Eberle JP, Bulkescher R, Reymann J, Chung I, Simon R, Sauter G, Starkuviene V, Rippe K, Erfle H (2022) Multiscale Fluorescent Imaging. In Single-Molecule Science - From Super-Resolution Microscopy to DNA Mapping and Diagnostics, Appasani K, Appasani RK (eds), pp 38-48. Cambridge: Cambridge University Press. doi: 10.1017/9781108525909.006 | Abstract | Reprint | Article metrics

Thorn GJ, Clarkson CT, Rademacher A, Mamayusupova H, Schotta G, Rippe K, Teif VB (2022). DNA sequence-dependent formation of heterochromatin nanodomains, Nat Commun 1861. doi: 10.1038/s41467-022-29360-y | Abstract | Reprint | Article metrics

Poos AM, Schröder C, Jaishankar N, Röll D, Oswald M, Meiners J, Braun D, Bauer C, Frank L, Gunkel M, Spilger R, Wollmann T, Polonski A, Makrypidi-Fraune G, Chung I, Stenzel A, Erfle H, Rohr K, Baniahmad A, Sauter G, Rippe K, Simon R, König R (2022) PITX1 regulates telomerase in prostate cancer with high prognostic power. Cancers 14, 1267. doi: 10.3390/cancers14051267 | Abstract | Reprint | Article metrics

Rippe K, Papantonis A (2022) Functional organization of RNA polymerase II in nuclear subcompartments Curr Opin Cell Biol 74, 88-96. doi: 10.1016/j.ceb.2022.01.005 | Abstract | Reprint | Article metrics

Frank L, Rademacher A, Mücke N, Tirier SM, Koeleman E, Knotz C, Schumacher S, Stainczyk SA, Westermann F, Fröhling S, Chudasama P, Rippe K (2022) ALT-FISH quantifies alternative lengthening of telomeres activity by imaging of single-stranded repeats. Nucleic Acids Res, gkac113. doi: 10.1093/nar/gkac113 | Abstract | Reprint | Article metrics

Berlin C, Cottard F, Willmann D, Urban S, Tirier SM, Marx L, Rippe K, Schmitt M, Petrocelli V, Greten FR, Fichtner-Feigl S, Kesselring R, Metzger E, Schüle R (2022) KMT9 controls stemness and growth of colorectal cancer. Cancer Res 82, 210-220. doi: 10.1158/0008-5472.CAN-21-1261 | Abstract | Reprint | Article metrics

Rippe K (2022) Liquid-liquid phase separation in chromatin. Cold Spring Harb Perspect Biol 14, a040683. doi: 10.1101/cshperspect.a040683 | Abstract | Reprint | Article metrics

Muckenhuber M, Lander I, Müller-Ott K, Erdel F, Mallm J-P, Klett LC, Bauer C, Hechler J, Kepper N, Rippe K (2022) Epigenetic signals that direct cell type specific interferon beta response in mouse cells. bioRxiv, 2022.2002.2026.481127. doi: 10.1101/2022.02.26.481127 | Preprint | Article metrics

Mallm J-P, Bundschuh C, Kim H, Weidner N, Steiger S, Lander I, Börner K, Bauer K, Hübschmann D, Benes V, Rausch T, Trevisan Doimo de Azevedo N, Telzerow A, Jost KL, Parthé S, Schnitzler P, Boutros M, Müller B, Bartenschlager R, Kräusslich H-G, Rippe K (2021) Local emergence and decline of a SARS-CoV-2 variant with mutations L452R and N501Y in the spike protein. medRxiv 2021.04.27.21254849. doi: 10.1101/2021.04.27.21254849 | Preprint | Article metrics

Bogeska R, Kaschutnig P, Fawaz M, Mikecin AM, Buechler-Schaff M, Paffenholz S, Asada N, Frauhammer F, Buettner F, Ball M, Knoch J, Staeble S, Walter D, Petri A, Correno-Gonzalez M, Wagner V, Brors B, Haas S, Lipka DB, Essers MAG, Holland-Letz T, Mallm JP, Rippe K, Frenette PS, Rieger MA, Milsom MD (2020) Hematopoietic stem cells fail to regenerate following inflammatory challenge. bioRxiv 230433. doi: 10.1101/2020.08.01.230433 | Preprint | Article metrics

Selected recent publications 2017-2022 (more selected publications)

Trojanowski J, Frank L, Rademacher A, Mücke N, Grigaitis P, Rippe K (2022) Transcription activation is enhanced by multivalent interactions independent of phase separation. Mol Cell published online 4 May 2022. doi: 10.1016/j.molcel.2022.04.017 | Abstract | Reprint | Article metrics

Frank L, Rademacher A, Mücke N, Tirier SM, Koeleman E, Knotz C, Schumacher S, Stainczyk SA, Westermann F, Fröhling S, Chudasama P, Rippe K (2022) ALT-FISH quantifies alternative lengthening of telomeres activity by imaging of single-stranded repeats. Nucleic Acids Res, gkac113. doi: 10.1093/nar/gkac113 | Abstract | Reprint | Article metrics

Tirier SM, Mallm J-P, Steiger S, Poos AM, Awwad M, Giesen N, Casiraghi N, Susak H, Bauer K, Baumann A, John L, Seckinger A, Hose D, Müller-Tidow C, Goldschmidt H, Stegle O, Hundemer M, Weinhold N, Raab MS, Rippe K (2021) Subclone specific microenvironmental impact and drug response in refractory multiple myeloma revealed by single cell transcriptomics. Nat Commun 12, 6960. doi: 10.1038/s41467-021-26951-z | Abstract | Reprint | Article metrics

Erdel F, Rademacher A, Vlijm R, Tünnermann J, Schweigert E, Frank L, Yserantant K, Hummert J, Bauer C, Schumacher S, Weinmann R, Alwash AA, Normand C, Herten D-P, Engelhardt J, Rippe K (2020) Mouse heterochromatin adopts digital compaction states without showing hallmarks of HP1-driven liquid-liquid phase separation. Mol Cell 78, 236-249.e7. doi: 10.1016/j.molcel.2020.02.005 | Abstract | Reprint | Article metrics | Comment

Mallm JP, Windisch P, Biran A, Schumacher S, Glass R, Herold-Mende C, Meshorer E, Barbus M, Rippe K (2020) Glioblastoma initiating cells are sensitive to histone demethylase inhibition due to loss of DNA repair capacity. Intl J Cancer 146, 1281-1292. doi: 10.1002/ijc.32649 | Abstract | Reprint | Article metrics

Mallm JP, Iskar M, Ishaque N, Klett LC, Kugler SJ, Muino JM, Teif VB, Poos AM, Großmann S, Erdel F, Tavernari D, Koser SD, Schumacher S, Brors B, König R, Remondini D, Vingron M, Stilgenbauer S, Lichter P, Zapatka M, Mertens D & Rippe K (2019) Linking aberrant chromatin features in chronic lymphocytic leukemia to deregulated transcription factor networks. Mol Syst Biol 15, e8339. doi: 10.15252/msb.20188339 | Abstract | Reprint | Appendix | Additional data | Article metrics

Rademacher A, Erdel F, Trojanowski J, Schumacher S & Rippe K (2017). Real-time observation of light-controlled transcription in living cells. J Cell Sci 130, 4213-4224. doi: 10.1242/jcs.205534 | Abstract | Reprint | JCS First person | Article metrics

All publications 1989-2021

All publications Karsten Rippe, h-index 66 (Google Scholar)

Publications and bibliometric data of Karsten Rippe from databases

Yearly citation numbers of Karsten Rippe from 2003 to 2021. Total number of citations: 15718, h-index: 66, i10 index: 152. Bibliometric data are taken from Google Scholar.

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